myRT

myRT report for GCA_001251735.1_11822_8_62

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Seq: CWWQ01000188.1 Shigella sonnei genome assembly 11822_8#62, scaffold ERS369553SCcontig000188, whole genome shotgun sequence (7231 bp)
Overview 1 RT 1: 951-7016 bp Neighborhood of RT #1 [951, 7033] HTH_54 BcsQ sopB_N ParB RVT-GII Tra5 Feature: gene Location: 951-2150 bp Feature: domain Description: HTH_54 Location: 993-1266 bp Feature: domain Description: HTH_54 Location: 993-1 266 bp Feature: domain Description: BcsQ Location: 1281-2127 bp Feature: domain Description: BcsQ Location: 1 281 -21 27 bp Feature: gene Location: 2150-3130 bp Feature: domain Description: sopB_N Location: 2327-2522 bp Feature: domain Description: sopB_N Location: 2327-2522 bp Feature: domain Description: ParB Location: 2735-3110 bp Feature: domain Description: ParB Location: 2735-31 1 0 bp Feature: gene Location: 4685-5374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4886-5348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4886-5348 bp Feature: gene Location: 6260-6898 bp Feature: gene Location: 6812-7033 bp Feature: domain Description: Tra5 Location: 6824-7016 bp Feature: domain Description: Tra5 Location: 6824-701 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sopB_N (cd16394), ParB (smart00470), RVT-GII, Tra5 (COG2801), HTH_54 (pfam18607), BcsQ (COG1192)