myRT

myRT report for GCA_001252075.1_5174_5_7

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Seq: CWRP01000004.1 Vibrio cholerae genome assembly 5174_5#7, scaffold ERS013271SCcontig000004, whole genome shotgun sequence (344048 bp)
Overview 1 RT 1: 215367-220506 bp Neighborhood of RT #1 [215367, 220628] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 215367-216227 bp Ori: CSD32746.1 Feature: domain Description: LysR Location: 215373-216201 bp Feature: domain Description: LysR Location: 21 5373-21 6201 bp Feature: gene Location: 216157-216942 bp Ori: CSD32776.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 216166-216937 bp Feature: domain Description: PRK1 0621 Location: 21 61 66-21 6937 bp Feature: gene Location: 217428-218375 bp Ori: CSD32820.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 217542-218139 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 7542-21 81 39 bp Feature: gene Location: 218376-219998 bp Ori: CSD32852.1 Feature: domain Description: COG3950 Location: 218562-219993 bp Feature: domain Description: COG3950 Location: 21 8562-21 9993 bp Feature: gene Location: 220011-220628 bp Ori: CSD32886.1 Feature: domain Description: TIGR02646 Location: 220122-220506 bp Feature: domain Description: TIGR02646 Location: 2201 22-220506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)