myRT

myRT report for GCA_001252495.1_5174_7_7

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Seq: CWSJ01000003.1 Vibrio cholerae genome assembly 5174_7#7, scaffold ERS013248SCcontig000003, whole genome shotgun sequence (377137 bp)
Overview 1 RT 1: 123410-128645 bp Neighborhood of RT #1 [123410, 128671] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123410-124027 bp Ori: CSD63739.1 Feature: domain Description: TIGR02646 Location: 123521-123905 bp Feature: domain Description: TIGR02646 Location: 1 23521 -1 23905 bp Feature: gene Location: 124040-125662 bp Ori: CSD63767.1 Feature: domain Description: COG3950 Location: 124226-125657 bp Feature: domain Description: COG3950 Location: 1 24226-1 25657 bp Feature: gene Location: 125663-126610 bp Ori: CSD63791.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125777-126374 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25777-1 26374 bp Feature: gene Location: 127096-127881 bp Ori: CSD63820.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 127105-127876 bp Feature: domain Description: PRK1 0621 Location: 1 271 05-1 27876 bp Feature: gene Location: 127811-128671 bp Ori: CSD63853.1 Feature: domain Description: LysR Location: 127817-128645 bp Feature: domain Description: LysR Location: 1 2781 7-1 28645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)

Seq: CWSJ01000028.1 Vibrio cholerae genome assembly 5174_7#7, scaffold ERS013248SCcontig000028, whole genome shotgun sequence (5075 bp)
Overview 1 RT 1: 697-4868 bp Neighborhood of RT #1 [697, 4868] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 697-1134 bp Ori: CSE19576.1 Feature: domain Description: Nudix_Hydrolase_7 Location: 709-1102 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 709-1102 bp Feature: gene Location: 1355-1642 bp Feature: gene Location: 1783-3348 bp Ori: CSE19596.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2218-2695 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2 2 18-2 695 bp Feature: gene Location: 3484-4044 bp Feature: gene Location: 4194-4868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14