myRT

myRT report for GCA_001252895.1_5174_6_1

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Seq: CWRS01000001.1 Vibrio cholerae genome assembly 5174_6#1, scaffold ERS013232SCcontig000001, whole genome shotgun sequence (738876 bp)
Overview 1 RT 1: 610192-614817 bp Neighborhood of RT #1 [610192, 614822] LysR PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 610192-611052 bp Ori: CSC99883.1 Feature: domain Description: LysR Location: 610198-611026 bp Feature: domain Description: LysR Location: 61 01 98-61 1 026 bp Feature: gene Location: 610982-611767 bp Ori: CSC99907.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 610991-611762 bp Feature: domain Description: PRK1 0621 Location: 61 0991 -61 1 762 bp Feature: gene Location: 612253-613200 bp Ori: CSC99932.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 612367-612964 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 2367-61 2964 bp Feature: gene Location: 613201-614121 bp Ori: CSC99954.1 Feature: domain Description: COG3950 Location: 613387-614086 bp Feature: domain Description: COG3950 Location: 61 3387-61 4086 bp Feature: gene Location: 614211-614822 bp Ori: CSC99974.1 Feature: domain Description: COG3950 Location: 614214-614817 bp Feature: domain Description: COG3950 Location: 61 421 4-61 481 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )