myRT

myRT report for GCA_001253035.1_5174_5_1

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Seq: CWRJ01000002.1 Vibrio cholerae genome assembly 5174_5#1, scaffold ERS013265SCcontig000002, whole genome shotgun sequence (737576 bp)
Overview 1 RT 1: 608890-614029 bp Neighborhood of RT #1 [608890, 614151] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 608890-609750 bp Ori: CSC89694.1 Feature: domain Description: LysR Location: 608896-609724 bp Feature: domain Description: LysR Location: 608896-609724 bp Feature: gene Location: 609680-610465 bp Ori: CSC89720.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 609689-610460 bp Feature: domain Description: PRK1 0621 Location: 609689-61 0460 bp Feature: gene Location: 610951-611898 bp Ori: CSC89748.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 611065-611662 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 1 065-61 1 662 bp Feature: gene Location: 611899-613521 bp Ori: CSC89772.1 Feature: domain Description: COG3950 Location: 612085-613516 bp Feature: domain Description: COG3950 Location: 61 2085-61 351 6 bp Feature: gene Location: 613534-614151 bp Ori: CSC89794.1 Feature: domain Description: TIGR02646 Location: 613645-614029 bp Feature: domain Description: TIGR02646 Location: 61 3645-61 4029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)