myRT

myRT report for GCA_001253335.1_Sg_201312520_TCCCGA_L001

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Seq: CWUX01000008.1 Shigella sonnei genome assembly Sg_201312520_TCCCGA_L001, scaffold SCcontig000008, whole genome shotgun sequence (69808 bp)
Overview 1 RT 1: 17363-24124 bp Neighborhood of RT #1 [17363, 24126] SLATT_5 RVT-UG17 phage_tail_N Collar Ail_Lom Feature: gene Location: 17363-17530 bp Feature: gene Location: 17657-18208 bp Ori: CSG72948.1 Feature: domain Description: SLATT_5 Location: 17663-18179 bp Feature: domain Description: SLATT_5 Location: 1 7663-1 81 79 bp Feature: gene Location: 18186-19556 bp Ori: CSG72952.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 18414-19020 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 841 4-1 9020 bp Feature: gene Location: 20253-23462 bp Ori: CSG72956.1 Feature: domain Description: phage_tail_N Location: 20256-20655 bp Feature: domain Description: phage_tail_N Location: 20256-20655 bp Feature: domain Description: Collar Location: 22785-22923 bp Feature: domain Description: Collar Location: 22785-22923 bp Feature: gene Location: 23527-24126 bp Ori: CSG72960.1 Gene: ompX_2 Feature: domain Description: Ail_Lom Location: 23530-24124 bp Feature: domain Description: Ail_Lom Location: 23530-241 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, phage_tail_N (pfam08400), Collar (pfam07484), Ail_Lom (pfam06316)