myRT

myRT report for GCA_001253575.1_4056_2_8

Download annotations/find similar RTs

Seq: CWNN01000003.1 Vibrio cholerae genome assembly 4056_2#8, scaffold ERS013128SCcontig000003, whole genome shotgun sequence (343735 bp)
Overview 1 RT 1: 214830-219475 bp Neighborhood of RT #1 [214830, 219480] LysR PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 214830-215690 bp Ori: CRZ43831.1 Feature: domain Description: LysR Location: 214836-215664 bp Feature: domain Description: LysR Location: 21 4836-21 5664 bp Feature: gene Location: 215620-216405 bp Ori: CRZ43833.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 215629-216400 bp Feature: domain Description: PRK1 0621 Location: 21 5629-21 6400 bp Feature: gene Location: 216911-217858 bp Ori: CRZ43836.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 217025-217622 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 7025-21 7622 bp Feature: gene Location: 217859-218656 bp Ori: CRZ43839.1 Feature: domain Description: COG3950 Location: 218045-218600 bp Feature: domain Description: COG3950 Location: 21 8045-21 8600 bp Feature: gene Location: 218869-219480 bp Ori: CRZ43843.1 Feature: domain Description: COG3950 Location: 218872-219475 bp Feature: domain Description: COG3950 Location: 21 8872-21 9475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )