myRT

myRT report for GCA_001253695.1_5174_8_2

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Seq: CWSK01000001.1 Vibrio cholerae genome assembly 5174_8#2, scaffold ERS013275SCcontig000001, whole genome shotgun sequence (737588 bp)
Overview 1 RT 1: 123426-128661 bp Neighborhood of RT #1 [123426, 128687] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123426-124043 bp Ori: CSD34148.1 Feature: domain Description: TIGR02646 Location: 123537-123921 bp Feature: domain Description: TIGR02646 Location: 1 23537-1 23921 bp Feature: gene Location: 124056-125678 bp Ori: CSD34176.1 Feature: domain Description: COG3950 Location: 124242-125673 bp Feature: domain Description: COG3950 Location: 1 24242-1 25673 bp Feature: gene Location: 125679-126626 bp Ori: CSD34207.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125793-126390 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25793-1 26390 bp Feature: gene Location: 127112-127897 bp Ori: CSD34246.1 Gene: yfcA_1 Feature: domain Description: PRK10621 Location: 127121-127892 bp Feature: domain Description: PRK1 0621 Location: 1 271 21 -1 27892 bp Feature: gene Location: 127827-128687 bp Ori: CSD34295.1 Feature: domain Description: LysR Location: 127833-128661 bp Feature: domain Description: LysR Location: 1 27833-1 28661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)