myRT

myRT report for GCA_001253795.1_Sg_201401124_ATGTCA_L001

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Seq: CWVP01000005.1 Shigella sonnei genome assembly Sg_201401124_ATGTCA_L001, scaffold SCcontig000005, whole genome shotgun sequence (69949 bp)
Overview 1 RT 1: 46754-52582 bp Neighborhood of RT #1 [46754, 52582] Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber RVT-UG17 SLATT_5 Feature: gene Location: 46754-47491 bp Feature: gene Location: 47622-49655 bp Ori: CSH32209.1 Feature: domain Description: Phage_fiber_2 Location: 47643-47763 bp Feature: domain Description: Phage_fiber_2 Location: 47643-47763 bp Feature: domain Description: Collar Location: 48978-49116 bp Feature: domain Description: Collar Location: 48978-491 1 6 bp Feature: domain Description: Phage_fiber Location: 49167-49206 bp Feature: domain Description: Phage_fiber Location: 491 67-49206 bp Feature: domain Description: Phage_fiber Location: 49263-49302 bp Feature: domain Description: Phage_fiber Location: 49263-49302 bp Feature: domain Description: Phage_fiber Location: 49458-49497 bp Feature: domain Description: Phage_fiber Location: 49458-49497 bp Feature: domain Description: Phage_fiber Location: 49503-49536 bp Feature: domain Description: Phage_fiber Location: 49503-49536 bp Feature: gene Location: 50389-51759 bp Ori: CSH32224.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 50617-51223 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 5061 7-51 223 bp Feature: gene Location: 51737-52288 bp Ori: CSH32240.1 Feature: domain Description: SLATT_5 Location: 51743-52259 bp Feature: domain Description: SLATT_5 Location: 51 743-52259 bp Feature: gene Location: 52415-52582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), RVT-UG17, SLATT_5 (pfam18160)