myRT

myRT report for GCA_001254055.1_5174_7_3

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Seq: CWSC01000001.1 Vibrio cholerae genome assembly 5174_7#3, scaffold ERS013244SCcontig000001, whole genome shotgun sequence (737233 bp)
Overview 1 RT 1: 123494-128657 bp Neighborhood of RT #1 [123494, 128683] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123494-124039 bp Ori: CSD19819.1 Feature: domain Description: TIGR02646 Location: 123605-123977 bp Feature: domain Description: TIGR02646 Location: 1 23605-1 23977 bp Feature: gene Location: 124052-125674 bp Ori: CSD19836.1 Feature: domain Description: COG3950 Location: 124238-125669 bp Feature: domain Description: COG3950 Location: 1 24238-1 25669 bp Feature: gene Location: 125675-126622 bp Ori: CSD19857.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125789-126386 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25789-1 26386 bp Feature: gene Location: 127108-127893 bp Ori: CSD19880.1 Gene: yfcA_1 Feature: domain Description: PRK10621 Location: 127117-127888 bp Feature: domain Description: PRK1 0621 Location: 1 271 1 7-1 27888 bp Feature: gene Location: 127823-128683 bp Ori: CSD19901.1 Feature: domain Description: LysR Location: 127829-128657 bp Feature: domain Description: LysR Location: 1 27829-1 28657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)