myRT

myRT report for GCA_001254335.1_5174_6_4

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Seq: CWRV01000007.1 Vibrio cholerae genome assembly 5174_6#4, scaffold ERS013235SCcontig000007, whole genome shotgun sequence (236939 bp)
Overview 1 RT 1: 108257-113396 bp Neighborhood of RT #1 [108257, 113518] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 108257-109117 bp Ori: CSD59372.1 Feature: domain Description: LysR Location: 108263-109091 bp Feature: domain Description: LysR Location: 1 08263-1 09091 bp Feature: gene Location: 109047-109832 bp Ori: CSD59399.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 109056-109827 bp Feature: domain Description: PRK1 0621 Location: 1 09056-1 09827 bp Feature: gene Location: 110318-111265 bp Ori: CSD59433.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 110432-111029 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 0432-1 1 1 029 bp Feature: gene Location: 111266-112888 bp Ori: CSD59465.1 Feature: domain Description: COG3950 Location: 111452-112883 bp Feature: domain Description: COG3950 Location: 1 1 1 452-1 1 2883 bp Feature: gene Location: 112901-113518 bp Ori: CSD59497.1 Feature: domain Description: TIGR02646 Location: 113012-113396 bp Feature: domain Description: TIGR02646 Location: 1 1 301 2-1 1 3396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)