myRT

myRT report for GCA_001254355.1_5174_8_9

Download annotations/find similar RTs

Seq: CWSQ01000001.1 Vibrio cholerae genome assembly 5174_8#9, scaffold ERS013282SCcontig000001, whole genome shotgun sequence (824744 bp)
Overview 1 RT 1: 220653-225888 bp Neighborhood of RT #1 [220653, 225914] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 220653-221270 bp Ori: CSD59604.1 Feature: domain Description: TIGR02646 Location: 220764-221148 bp Feature: domain Description: TIGR02646 Location: 220764-221 1 48 bp Feature: gene Location: 221283-222905 bp Ori: CSD59632.1 Feature: domain Description: COG3950 Location: 221469-222900 bp Feature: domain Description: COG3950 Location: 221 469-222900 bp Feature: gene Location: 222906-223853 bp Ori: CSD59662.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 223020-223617 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 223020-22361 7 bp Feature: gene Location: 224339-225124 bp Ori: CSD59694.1 Gene: yfcA_1 Feature: domain Description: PRK10621 Location: 224348-225119 bp Feature: domain Description: PRK1 0621 Location: 224348-2251 1 9 bp Feature: gene Location: 225054-225914 bp Ori: CSD59727.1 Feature: domain Description: LysR Location: 225060-225888 bp Feature: domain Description: LysR Location: 225060-225888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)