myRT

myRT report for GCA_001254435.1_5174_7_2

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Seq: CWSB01000002.1 Vibrio cholerae genome assembly 5174_7#2, scaffold ERS013243SCcontig000002, whole genome shotgun sequence (770851 bp)
Overview 1 RT 1: 123421-128656 bp Neighborhood of RT #1 [123421, 128682] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123421-124038 bp Ori: CSD45400.1 Feature: domain Description: TIGR02646 Location: 123532-123916 bp Feature: domain Description: TIGR02646 Location: 1 23532-1 2391 6 bp Feature: gene Location: 124051-125673 bp Ori: CSD45425.1 Feature: domain Description: COG3950 Location: 124237-125668 bp Feature: domain Description: COG3950 Location: 1 24237-1 25668 bp Feature: gene Location: 125674-126621 bp Ori: CSD45450.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125788-126385 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25788-1 26385 bp Feature: gene Location: 127107-127892 bp Ori: CSD45485.1 Gene: yfcA_1 Feature: domain Description: PRK10621 Location: 127116-127887 bp Feature: domain Description: PRK1 0621 Location: 1 271 1 6-1 27887 bp Feature: gene Location: 127822-128682 bp Ori: CSD45522.1 Feature: domain Description: LysR Location: 127828-128656 bp Feature: domain Description: LysR Location: 1 27828-1 28656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)