myRT

myRT report for GCA_001254635.1_5174_5_3

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Seq: CWRM01000002.1 Vibrio cholerae genome assembly 5174_5#3, scaffold ERS013267SCcontig000002, whole genome shotgun sequence (738731 bp)
Overview 1 RT 1: 610048-614673 bp Neighborhood of RT #1 [610048, 614678] LysR PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 610048-610908 bp Ori: CSD10980.1 Feature: domain Description: LysR Location: 610054-610882 bp Feature: domain Description: LysR Location: 61 0054-61 0882 bp Feature: gene Location: 610838-611623 bp Ori: CSD11002.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 610847-611618 bp Feature: domain Description: PRK1 0621 Location: 61 0847-61 1 61 8 bp Feature: gene Location: 612109-613056 bp Ori: CSD11026.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 612223-612820 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 2223-61 2820 bp Feature: gene Location: 613057-613977 bp Ori: CSD11053.1 Feature: domain Description: COG3950 Location: 613243-613942 bp Feature: domain Description: COG3950 Location: 61 3243-61 3942 bp Feature: gene Location: 614067-614678 bp Ori: CSD11080.1 Feature: domain Description: COG3950 Location: 614070-614673 bp Feature: domain Description: COG3950 Location: 61 4070-61 4673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )