myRT

myRT report for GCA_001254675.1_5174_7_4

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Seq: CWSE01000001.1 Vibrio cholerae genome assembly 5174_7#4, scaffold ERS013245SCcontig000001, whole genome shotgun sequence (770697 bp)
Overview 1 RT 1: 123425-128660 bp Neighborhood of RT #1 [123425, 128686] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123425-124042 bp Ori: CSD25986.1 Feature: domain Description: TIGR02646 Location: 123536-123920 bp Feature: domain Description: TIGR02646 Location: 1 23536-1 23920 bp Feature: gene Location: 124055-125677 bp Ori: CSD26013.1 Feature: domain Description: COG3950 Location: 124241-125672 bp Feature: domain Description: COG3950 Location: 1 24241 -1 25672 bp Feature: gene Location: 125678-126625 bp Ori: CSD26042.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125792-126389 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25792-1 26389 bp Feature: gene Location: 127111-127896 bp Ori: CSD26070.1 Gene: yfcA_1 Feature: domain Description: PRK10621 Location: 127120-127891 bp Feature: domain Description: PRK1 0621 Location: 1 271 20-1 27891 bp Feature: gene Location: 127826-128686 bp Ori: CSD26103.1 Feature: domain Description: LysR Location: 127832-128660 bp Feature: domain Description: LysR Location: 1 27832-1 28660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)