myRT

myRT report for GCA_001255835.1_5174_6_9

Download annotations/find similar RTs

Seq: CWSA01000004.1 Vibrio cholerae genome assembly 5174_6#9, scaffold ERS013240SCcontig000004, whole genome shotgun sequence (345363 bp)
Overview 1 RT 1: 216682-221307 bp Neighborhood of RT #1 [216682, 221312] LysR PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 216682-217542 bp Ori: CSD74172.1 Feature: domain Description: LysR Location: 216688-217516 bp Feature: domain Description: LysR Location: 21 6688-21 751 6 bp Feature: gene Location: 217472-218257 bp Ori: CSD74210.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 217481-218252 bp Feature: domain Description: PRK1 0621 Location: 21 7481 -21 8252 bp Feature: gene Location: 218743-219690 bp Ori: CSD74244.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 218857-219454 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 8857-21 9454 bp Feature: gene Location: 219691-220611 bp Ori: CSD74275.1 Feature: domain Description: COG3950 Location: 219877-220576 bp Feature: domain Description: COG3950 Location: 21 9877-220576 bp Feature: gene Location: 220701-221312 bp Ori: CSD74310.1 Feature: domain Description: COG3950 Location: 220704-221307 bp Feature: domain Description: COG3950 Location: 220704-221 307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )