myRT

myRT report for GCA_001256815.1_Sg_201401237_CCGTCC_L001

Download annotations/find similar RTs

Seq: CWVO01000002.1 Shigella sonnei genome assembly Sg_201401237_CCGTCC_L001, scaffold SCcontig000002, whole genome shotgun sequence (79941 bp)
Overview 1 RT 1: 55622-62574 bp Neighborhood of RT #1 [55622, 62574] Ail_Lom phage_tail_N Collar RVT-UG17 SLATT_5 Feature: gene Location: 55622-56221 bp Ori: CSH13121.1 Gene: ompX_1 Feature: domain Description: Ail_Lom Location: 55625-56219 bp Feature: domain Description: Ail_Lom Location: 55625-5621 9 bp Feature: gene Location: 56286-59684 bp Ori: CSH13130.1 Feature: domain Description: phage_tail_N Location: 56289-56688 bp Feature: domain Description: phage_tail_N Location: 56289-56688 bp Feature: domain Description: Collar Location: 59007-59145 bp Feature: domain Description: Collar Location: 59007-591 45 bp Feature: gene Location: 60381-61751 bp Ori: CSH13142.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 60609-61215 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 60609-61 21 5 bp Feature: gene Location: 61729-62280 bp Ori: CSH13153.1 Feature: domain Description: SLATT_5 Location: 61735-62251 bp Feature: domain Description: SLATT_5 Location: 61 735-62251 bp Feature: gene Location: 62407-62574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ail_Lom (pfam06316), phage_tail_N (pfam08400), Collar (pfam07484), RVT-UG17, SLATT_5 (pfam18160)