myRT

myRT report for GCA_001256835.1_4056_7_12

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Seq: CWPP01000003.1 Vibrio cholerae genome assembly 4056_7#12, scaffold ERS013195SCcontig000003, whole genome shotgun sequence (346148 bp)
Overview 1 RT 1: 124392-129583 bp Neighborhood of RT #1 [124392, 129609] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 124392-125009 bp Ori: CSB25814.1 Feature: domain Description: TIGR02646 Location: 124503-124887 bp Feature: domain Description: TIGR02646 Location: 1 24503-1 24887 bp Feature: gene Location: 125022-126644 bp Ori: CSB25829.1 Feature: domain Description: COG3950 Location: 125208-126639 bp Feature: domain Description: COG3950 Location: 1 25208-1 26639 bp Feature: gene Location: 126645-127592 bp Ori: CSB25843.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126759-127356 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 26759-1 27356 bp Feature: gene Location: 128034-128819 bp Ori: CSB25853.1 Gene: yfcA_1 Feature: domain Description: PRK10621 Location: 128043-128814 bp Feature: domain Description: PRK1 0621 Location: 1 28043-1 2881 4 bp Feature: gene Location: 128749-129609 bp Ori: CSB25869.1 Feature: domain Description: LysR Location: 128755-129583 bp Feature: domain Description: LysR Location: 1 28755-1 29583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)