myRT

myRT report for GCA_001257735.1_12971_8_19

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Seq: CWXM01000053.1 Shigella sonnei genome assembly 12971_8#19, scaffold ERS432239SCcontig000053, whole genome shotgun sequence (23461 bp)
Overview 1 RT 1: 594-6094 bp Neighborhood of RT #1 [594, 6094] Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber RVT-UG17 SLATT_5 Feature: gene Location: 594-1751 bp Feature: gene Location: 2080-3204 bp Ori: CSJ74696.1 Feature: domain Description: Collar Location: 2575-2713 bp Feature: domain Description: Collar Location: 2575-271 3 bp Feature: domain Description: Phage_fiber Location: 2764-2803 bp Feature: domain Description: Phage_fiber Location: 2764-2803 bp Feature: domain Description: Phage_fiber Location: 2860-2899 bp Feature: domain Description: Phage_fiber Location: 2860-2899 bp Feature: domain Description: Phage_fiber Location: 2905-2932 bp Feature: domain Description: Phage_fiber Location: 2905-2932 bp Feature: domain Description: Phage_fiber Location: 3007-3046 bp Feature: domain Description: Phage_fiber Location: 3007-3046 bp Feature: domain Description: Phage_fiber Location: 3052-3082 bp Feature: domain Description: Phage_fiber Location: 3052-3082 bp Feature: gene Location: 3901-5271 bp Ori: CSJ74721.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4129-4735 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 41 29-4735 bp Feature: gene Location: 5249-5800 bp Ori: CSJ74744.1 Feature: domain Description: SLATT_5 Location: 5255-5771 bp Feature: domain Description: SLATT_5 Location: 5255-5771 bp Feature: gene Location: 5927-6094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Collar (pfam07484), Phage_fiber (pfam03335), RVT-UG17, SLATT_5 (pfam18160)