myRT

myRT report for GCA_001257815.1_5417_2_4

Download annotations/find similar RTs

Seq: CXEM01000208.1 Shigella sonnei genome assembly 5417_2#4, scaffold ERS008177SCcontig000208, whole genome shotgun sequence (5268 bp)
Overview 1 RT 1: 1642-4767 bp Neighborhood of RT #1 [1642, 4793] ushA RVT-GII Feature: gene Location: 1642-2142 bp Feature: domain Description: ushA Location: 1645-2140 bp Feature: domain Description: ushA Location: 1 645-21 40 bp Feature: gene Location: 2111-2296 bp Feature: gene Location: 4104-4793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4305-4767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4305-4767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ushA (PRK09558), RVT-GII

Seq: CXEM01000310.1 Shigella sonnei genome assembly 5417_2#4, scaffold ERS008177SCcontig000310, whole genome shotgun sequence (1683 bp)
Overview 1 RT 1: 152-1496 bp Neighborhood of RT #1 [152, 1513] RVT-GII Tra5 Feature: gene Location: 152-1246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1076 bp Feature: gene Location: 1292-1513 bp Feature: domain Description: Tra5 Location: 1304-1496 bp Feature: domain Description: Tra5 Location: 1304-1496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII