myRT

myRT report for GCA_001258095.1_Sg_201405358_CTCAGA_L001

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Seq: CWWO01000062.1 Shigella sonnei genome assembly Sg_201405358_CTCAGA_L001, scaffold SCcontig000062, whole genome shotgun sequence (23524 bp)
Overview 1 RT 1: 17375-23166 bp Neighborhood of RT #1 [17375, 23166] SLATT_5 RVT-UG17 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 17375-17542 bp Feature: gene Location: 17669-18220 bp Ori: CSI93359.1 Feature: domain Description: SLATT_5 Location: 17675-18191 bp Feature: domain Description: SLATT_5 Location: 1 7675-1 81 91 bp Feature: gene Location: 18198-19568 bp Ori: CSI93364.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 18426-19032 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 8426-1 9032 bp Feature: gene Location: 20265-22298 bp Ori: CSI93368.1 Feature: domain Description: Phage_fiber_2 Location: 20286-20406 bp Feature: domain Description: Phage_fiber_2 Location: 20286-20406 bp Feature: domain Description: Collar Location: 21621-21759 bp Feature: domain Description: Collar Location: 21 621 -21 759 bp Feature: domain Description: Phage_fiber Location: 21810-21849 bp Feature: domain Description: Phage_fiber Location: 21 81 0-21 849 bp Feature: domain Description: Phage_fiber Location: 21906-21945 bp Feature: domain Description: Phage_fiber Location: 21 906-21 945 bp Feature: domain Description: Phage_fiber Location: 22101-22140 bp Feature: domain Description: Phage_fiber Location: 221 01 -221 40 bp Feature: domain Description: Phage_fiber Location: 22146-22179 bp Feature: domain Description: Phage_fiber Location: 221 46-221 79 bp Feature: gene Location: 22429-23166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335)