myRT

myRT report for GCA_001258555.1_5174_6_3

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Seq: CWRU01000006.1 Vibrio cholerae genome assembly 5174_6#3, scaffold ERS013234SCcontig000006, whole genome shotgun sequence (235680 bp)
Overview 1 RT 1: 106987-111612 bp Neighborhood of RT #1 [106987, 111617] LysR PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 106987-107847 bp Ori: CSD36913.1 Feature: domain Description: LysR Location: 106993-107821 bp Feature: domain Description: LysR Location: 1 06993-1 07821 bp Feature: gene Location: 107777-108562 bp Ori: CSD36936.1 Gene: yfcA_1 Feature: domain Description: PRK10621 Location: 107786-108557 bp Feature: domain Description: PRK1 0621 Location: 1 07786-1 08557 bp Feature: gene Location: 109048-109995 bp Ori: CSD36961.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109162-109759 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 091 62-1 09759 bp Feature: gene Location: 109996-110916 bp Ori: CSD36988.1 Feature: domain Description: COG3950 Location: 110182-110881 bp Feature: domain Description: COG3950 Location: 1 1 01 82-1 1 0881 bp Feature: gene Location: 111006-111617 bp Ori: CSD37015.1 Feature: domain Description: COG3950 Location: 111009-111612 bp Feature: domain Description: COG3950 Location: 1 1 1 009-1 1 1 61 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )