myRT

myRT report for GCA_001259055.1_5174_5_9

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Seq: CWRQ01000001.1 Vibrio cholerae genome assembly 5174_5#9, scaffold ERS013273SCcontig000001, whole genome shotgun sequence (737563 bp)
Overview 1 RT 1: 123424-128659 bp Neighborhood of RT #1 [123424, 128685] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123424-124041 bp Ori: CSC86165.1 Feature: domain Description: TIGR02646 Location: 123535-123919 bp Feature: domain Description: TIGR02646 Location: 1 23535-1 2391 9 bp Feature: gene Location: 124054-125676 bp Ori: CSC86191.1 Feature: domain Description: COG3950 Location: 124240-125671 bp Feature: domain Description: COG3950 Location: 1 24240-1 25671 bp Feature: gene Location: 125677-126624 bp Ori: CSC86206.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125791-126388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25791 -1 26388 bp Feature: gene Location: 127110-127895 bp Ori: CSC86229.1 Gene: yfcA_1 Feature: domain Description: PRK10621 Location: 127119-127890 bp Feature: domain Description: PRK1 0621 Location: 1 271 1 9-1 27890 bp Feature: gene Location: 127825-128685 bp Ori: CSC86258.1 Feature: domain Description: LysR Location: 127831-128659 bp Feature: domain Description: LysR Location: 1 27831 -1 28659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)