myRT

myRT report for GCA_001260035.1_12971_8_20

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Seq: CWXT01000059.1 Shigella sonnei genome assembly 12971_8#20, scaffold ERS432240SCcontig000059, whole genome shotgun sequence (23076 bp)
Overview 1 RT 1: 209-5709 bp Neighborhood of RT #1 [209, 5709] Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber RVT-UG17 SLATT_5 Feature: gene Location: 209-1366 bp Feature: gene Location: 1695-2819 bp Ori: CSK06711.1 Feature: domain Description: Collar Location: 2190-2328 bp Feature: domain Description: Collar Location: 21 90-2328 bp Feature: domain Description: Phage_fiber Location: 2379-2418 bp Feature: domain Description: Phage_fiber Location: 2379-241 8 bp Feature: domain Description: Phage_fiber Location: 2475-2514 bp Feature: domain Description: Phage_fiber Location: 2475-251 4 bp Feature: domain Description: Phage_fiber Location: 2520-2547 bp Feature: domain Description: Phage_fiber Location: 2520-2547 bp Feature: domain Description: Phage_fiber Location: 2622-2661 bp Feature: domain Description: Phage_fiber Location: 2622-2661 bp Feature: domain Description: Phage_fiber Location: 2667-2697 bp Feature: domain Description: Phage_fiber Location: 2667-2697 bp Feature: gene Location: 3516-4886 bp Ori: CSK06733.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3744-4350 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3744-4350 bp Feature: gene Location: 4864-5415 bp Ori: CSK06754.1 Feature: domain Description: SLATT_5 Location: 4870-5386 bp Feature: domain Description: SLATT_5 Location: 4870-5386 bp Feature: gene Location: 5542-5709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Collar (pfam07484), Phage_fiber (pfam03335), RVT-UG17, SLATT_5 (pfam18160)