myRT

myRT report for GCA_001260095.1_Sg_201401743_CGTACG_L001

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Seq: CWVS01000007.1 Shigella sonnei genome assembly Sg_201401743_CGTACG_L001, scaffold SCcontig000007, whole genome shotgun sequence (70254 bp)
Overview 1 RT 1: 45535-52887 bp Neighborhood of RT #1 [45535, 52887] Ail_Lom phage_tail_N Collar RVT-UG17 SLATT_5 Feature: gene Location: 45535-46134 bp Ori: CSH28272.1 Gene: ompX_1 Feature: domain Description: Ail_Lom Location: 45538-46132 bp Feature: domain Description: Ail_Lom Location: 45538-461 32 bp Feature: gene Location: 46199-49597 bp Ori: CSH28289.1 Feature: domain Description: phage_tail_N Location: 46202-46601 bp Feature: domain Description: phage_tail_N Location: 46202-46601 bp Feature: domain Description: Collar Location: 48920-49058 bp Feature: domain Description: Collar Location: 48920-49058 bp Feature: gene Location: 50694-52064 bp Ori: CSH28307.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 50922-51528 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 50922-51 528 bp Feature: gene Location: 52042-52593 bp Ori: CSH28326.1 Feature: domain Description: SLATT_5 Location: 52048-52564 bp Feature: domain Description: SLATT_5 Location: 52048-52564 bp Feature: gene Location: 52720-52887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ail_Lom (pfam06316), phage_tail_N (pfam08400), Collar (pfam07484), RVT-UG17, SLATT_5 (pfam18160)