myRT

myRT report for GCA_001260175.1_5174_6_7

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Seq: CWRY01000005.1 Vibrio cholerae genome assembly 5174_6#7, scaffold ERS013238SCcontig000005, whole genome shotgun sequence (235676 bp)
Overview 1 RT 1: 123418-128653 bp Neighborhood of RT #1 [123418, 128679] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123418-124035 bp Ori: CSD51984.1 Feature: domain Description: TIGR02646 Location: 123529-123913 bp Feature: domain Description: TIGR02646 Location: 1 23529-1 2391 3 bp Feature: gene Location: 124048-125670 bp Ori: CSD52006.1 Feature: domain Description: COG3950 Location: 124234-125665 bp Feature: domain Description: COG3950 Location: 1 24234-1 25665 bp Feature: gene Location: 125671-126618 bp Ori: CSD52031.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125785-126382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25785-1 26382 bp Feature: gene Location: 127104-127889 bp Ori: CSD52064.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 127113-127884 bp Feature: domain Description: PRK1 0621 Location: 1 271 1 3-1 27884 bp Feature: gene Location: 127819-128679 bp Ori: CSD52089.1 Feature: domain Description: LysR Location: 127825-128653 bp Feature: domain Description: LysR Location: 1 27825-1 28653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)