myRT

myRT report for GCA_001260335.1_5174_5_6

Download annotations/find similar RTs

Seq: CWRN01000007.1 Vibrio cholerae genome assembly 5174_5#6, scaffold ERS013270SCcontig000007, whole genome shotgun sequence (235670 bp)
Overview 1 RT 1: 106991-111616 bp Neighborhood of RT #1 [106991, 111621] LysR PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 106991-107851 bp Ori: CSD62968.1 Feature: domain Description: LysR Location: 106997-107825 bp Feature: domain Description: LysR Location: 1 06997-1 07825 bp Feature: gene Location: 107781-108566 bp Ori: CSD63001.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 107790-108561 bp Feature: domain Description: PRK1 0621 Location: 1 07790-1 08561 bp Feature: gene Location: 109052-109999 bp Ori: CSD63038.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109166-109763 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 091 66-1 09763 bp Feature: gene Location: 110000-110920 bp Ori: CSD63078.1 Feature: domain Description: COG3950 Location: 110186-110885 bp Feature: domain Description: COG3950 Location: 1 1 01 86-1 1 0885 bp Feature: gene Location: 111010-111621 bp Ori: CSD63108.1 Feature: domain Description: COG3950 Location: 111013-111616 bp Feature: domain Description: COG3950 Location: 1 1 1 01 3-1 1 1 61 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )