myRT

myRT report for GCA_001260915.1_4056_5_2

Download annotations/find similar RTs

Seq: CWOU01000003.1 Vibrio cholerae genome assembly 4056_5#2, scaffold ERS013170SCcontig000003, whole genome shotgun sequence (344415 bp)
Overview 1 RT 1: 215540-220178 bp Neighborhood of RT #1 [215540, 220183] LysR PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 215540-216400 bp Ori: CSA10619.1 Feature: domain Description: LysR Location: 215546-216374 bp Feature: domain Description: LysR Location: 21 5546-21 6374 bp Feature: gene Location: 216330-217115 bp Ori: CSA10646.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 216339-217110 bp Feature: domain Description: PRK1 0621 Location: 21 6339-21 71 1 0 bp Feature: gene Location: 217614-218561 bp Ori: CSA10680.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 217728-218325 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 7728-21 8325 bp Feature: gene Location: 218562-219359 bp Ori: CSA10717.1 Feature: domain Description: COG3950 Location: 218748-219303 bp Feature: domain Description: COG3950 Location: 21 8748-21 9303 bp Feature: gene Location: 219572-220183 bp Ori: CSA10750.1 Feature: domain Description: COG3950 Location: 219575-220178 bp Feature: domain Description: COG3950 Location: 21 9575-2201 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )