myRT

myRT report for GCA_001261075.1_4075_3_9

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Seq: CWQM01000005.1 Vibrio cholerae genome assembly 4075_3#9, scaffold ERS013139SCcontig000005, whole genome shotgun sequence (235834 bp)
Overview 1 RT 1: 123528-128763 bp Neighborhood of RT #1 [123528, 128789] TIGR02646 COG3950 RVT-Retrons PRK10621 LysR Feature: gene Location: 123528-124145 bp Ori: CSC11214.1 Feature: domain Description: TIGR02646 Location: 123639-124023 bp Feature: domain Description: TIGR02646 Location: 1 23639-1 24023 bp Feature: gene Location: 124158-125780 bp Ori: CSC11240.1 Feature: domain Description: COG3950 Location: 124344-125775 bp Feature: domain Description: COG3950 Location: 1 24344-1 25775 bp Feature: gene Location: 125781-126728 bp Ori: CSC11277.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125895-126492 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25895-1 26492 bp Feature: gene Location: 127214-127999 bp Ori: CSC11313.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 127223-127994 bp Feature: domain Description: PRK1 0621 Location: 1 27223-1 27994 bp Feature: gene Location: 127929-128789 bp Ori: CSC11349.1 Feature: domain Description: LysR Location: 127935-128763 bp Feature: domain Description: LysR Location: 1 27935-1 28763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK10621 (hypothetical protein; Provisional), LysR (COG0583)