myRT

myRT report for GCA_001261435.1_Sg_201402995_ATTCCT_L001

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Seq: CWVW01000003.1 Shigella sonnei genome assembly Sg_201402995_ATTCCT_L001, scaffold SCcontig000003, whole genome shotgun sequence (80053 bp)
Overview 1 RT 1: 56297-62679 bp Neighborhood of RT #1 [56297, 62679] Ail_Lom phage_tail_N Phage_fiber_2 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber RVT-UG17 SLATT_5 Feature: gene Location: 56297-56896 bp Ori: CSH33220.1 Gene: ompX_1 Feature: domain Description: Ail_Lom Location: 56300-56894 bp Feature: domain Description: Ail_Lom Location: 56300-56894 bp Feature: gene Location: 56961-59789 bp Ori: CSH33235.1 Feature: domain Description: phage_tail_N Location: 56964-57363 bp Feature: domain Description: phage_tail_N Location: 56964-57363 bp Feature: domain Description: Phage_fiber_2 Location: 58347-58467 bp Feature: domain Description: Phage_fiber_2 Location: 58347-58467 bp Feature: domain Description: Phage_fiber_2 Location: 58479-58596 bp Feature: domain Description: Phage_fiber_2 Location: 58479-58596 bp Feature: domain Description: Collar Location: 59112-59250 bp Feature: domain Description: Collar Location: 591 1 2-59250 bp Feature: domain Description: Phage_fiber Location: 59301-59340 bp Feature: domain Description: Phage_fiber Location: 59301 -59340 bp Feature: domain Description: Phage_fiber Location: 59397-59436 bp Feature: domain Description: Phage_fiber Location: 59397-59436 bp Feature: domain Description: Phage_fiber Location: 59601-59631 bp Feature: domain Description: Phage_fiber Location: 59601 -59631 bp Feature: domain Description: Phage_fiber Location: 59637-59670 bp Feature: domain Description: Phage_fiber Location: 59637-59670 bp Feature: gene Location: 60486-61856 bp Ori: CSH33250.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 60714-61320 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 6071 4-61 320 bp Feature: gene Location: 61834-62385 bp Ori: CSH33266.1 Feature: domain Description: SLATT_5 Location: 61840-62356 bp Feature: domain Description: SLATT_5 Location: 61 840-62356 bp Feature: gene Location: 62512-62679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ail_Lom (pfam06316), phage_tail_N (pfam08400), Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), RVT-UG17, SLATT_5 (pfam18160)