myRT

myRT report for GCA_001261535.1_5174_8_8

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Seq: CWSP01000008.1 Vibrio cholerae genome assembly 5174_8#8, scaffold ERS013281SCcontig000008, whole genome shotgun sequence (235689 bp)
Overview 1 RT 1: 107004-112143 bp Neighborhood of RT #1 [107004, 112265] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 107004-107864 bp Ori: CSE16393.1 Feature: domain Description: LysR Location: 107010-107838 bp Feature: domain Description: LysR Location: 1 0701 0-1 07838 bp Feature: gene Location: 107794-108579 bp Ori: CSE16405.1 Gene: yfcA_2 Feature: domain Description: PRK10621 Location: 107803-108574 bp Feature: domain Description: PRK1 0621 Location: 1 07803-1 08574 bp Feature: gene Location: 109065-110012 bp Ori: CSE16415.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109179-109776 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 091 79-1 09776 bp Feature: gene Location: 110013-111635 bp Ori: CSE16428.1 Feature: domain Description: COG3950 Location: 110199-111630 bp Feature: domain Description: COG3950 Location: 1 1 01 99-1 1 1 630 bp Feature: gene Location: 111648-112265 bp Ori: CSE16444.1 Feature: domain Description: TIGR02646 Location: 111759-112143 bp Feature: domain Description: TIGR02646 Location: 1 1 1 759-1 1 21 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)