myRT

myRT report for GCA_001261615.1_12971_8_21

Download annotations/find similar RTs

Seq: CWYB01000054.1 Shigella sonnei genome assembly 12971_8#21, scaffold ERS432241SCcontig000054, whole genome shotgun sequence (25006 bp)
Overview 1 RT 1: 2139-7639 bp Neighborhood of RT #1 [2139, 7639] Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber RVT-UG17 SLATT_5 Feature: gene Location: 2139-3296 bp Feature: gene Location: 3625-4749 bp Ori: CSK34262.1 Feature: domain Description: Collar Location: 4120-4258 bp Feature: domain Description: Collar Location: 41 20-4258 bp Feature: domain Description: Phage_fiber Location: 4309-4348 bp Feature: domain Description: Phage_fiber Location: 4309-4348 bp Feature: domain Description: Phage_fiber Location: 4405-4444 bp Feature: domain Description: Phage_fiber Location: 4405-4444 bp Feature: domain Description: Phage_fiber Location: 4450-4477 bp Feature: domain Description: Phage_fiber Location: 4450-4477 bp Feature: domain Description: Phage_fiber Location: 4552-4591 bp Feature: domain Description: Phage_fiber Location: 4552-4591 bp Feature: domain Description: Phage_fiber Location: 4597-4627 bp Feature: domain Description: Phage_fiber Location: 4597-4627 bp Feature: gene Location: 5446-6816 bp Ori: CSK34278.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5674-6280 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 5674-6280 bp Feature: gene Location: 6794-7345 bp Ori: CSK34287.1 Feature: domain Description: SLATT_5 Location: 6800-7316 bp Feature: domain Description: SLATT_5 Location: 6800-731 6 bp Feature: gene Location: 7472-7639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Collar (pfam07484), Phage_fiber (pfam03335), RVT-UG17, SLATT_5 (pfam18160)