myRT

myRT report for GCA_001263055.1_ASM126305v1

Download annotations/find similar RTs

Seq: LHAF01000013.1 Streptococcus pneumoniae strain Case B non-serotyeable 28682_2_contig_13, whole genome shotgun sequence (137983 bp)
Overview 1 RT 1: 42444-46372 bp Neighborhood of RT #1 [42444, 46386] RimL Acetyltransf_10 RVT-GII GIIM Fst_toxin Feature: gene Location: 42444-43139 bp Ori: KNY52097.1 Feature: domain Description: RimL Location: 42567-43059 bp Feature: domain Description: RimL Location: 42567-43059 bp Feature: gene Location: 43151-43567 bp Ori: KNY52098.1 Feature: domain Description: Acetyltransf_10 Location: 43229-43520 bp Feature: domain Description: Acetyltransf_1 0 Location: 43229-43520 bp Feature: gene Location: 44307-45155 bp Ori: KNY52099.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44511-45084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4451 1 -45084 bp Feature: gene Location: 45178-45564 bp Ori: KNY52100.1 Feature: domain Description: GIIM Note: maturase Location: 45181-45373 bp Feature: domain Description: GIIM Note: maturase Location: 451 81 -45373 bp Feature: gene Location: 46294-46386 bp Ori: KNY52101.1 Feature: domain Description: Fst_toxin Location: 46312-46372 bp Feature: domain Description: Fst_toxin Location: 4631 2-46372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), Acetyltransf_10 (pfam13673), RVT-GII, GIIM (pfam08388), Fst_toxin (pfam13955)

Seq: LHAF01000011.1 Streptococcus pneumoniae strain Case B non-serotyeable 28682_2_contig_11, whole genome shotgun sequence (80892 bp)
Overview 1 RT 1: 18616-26411 bp Neighborhood of RT #1 [18616, 26416] PRK04813 DUF3687 RVT-GII GIIM RVT-GII GlpF Feature: gene Location: 18616-20166 bp Ori: KNY52251.1 Feature: domain Description: PRK04813 Location: 18634-20161 bp Feature: domain Description: PRK04813 Location: 18634-2 0161 bp Feature: gene Location: 20187-20318 bp Ori: KNY52252.1 Feature: domain Description: DUF3687 Location: 20199-20316 bp Feature: domain Description: DUF3687 Location: 2 0199-2 0316 bp Feature: gene Location: 22262-23254 bp Ori: KNY52253.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22265-22796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 2 65-2 2 796 bp Feature: domain Description: GIIM Note: maturase Location: 22850-23063 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 850-2 3063 bp Feature: gene Location: 23258-23539 bp Ori: KNY52254.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23462-23534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3462 -2 3534 bp Feature: gene Location: 24301-24498 bp Feature: gene Location: 25712-26416 bp Ori: KNY52256.1 Feature: domain Description: GlpF Location: 25715-26411 bp Feature: domain Description: GlpF Location: 2 5715-2 6411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04813 (D-alanine--poly(phosphoribitol) ligase subunit DltA), DUF3687 (pfam12459), RVT-GII, GIIM (pfam08388), GlpF (COG0580)