myRT

myRT report for GCA_001265335.1_302014

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Seq: JHRE01000104.1 Escherichia coli strain 302014 302014_104, whole genome shotgun sequence (10520 bp)
Overview 1 RT 1: 1-2504 bp Neighborhood of RT #1 [1, 2539] RVT-GII GIIM PHA02517 Glu-decarb-GAD Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6-544 bp Feature: domain Description: GIIM Note: maturase Location: 619-817 bp Feature: domain Description: GIIM Note: maturase Location: 61 9-81 7 bp Feature: gene Location: 1215-1631 bp Feature: domain Description: PHA02517 Location: 1218-1620 bp Feature: domain Description: PHA0251 7 Location: 1 21 8-1 620 bp Feature: gene Location: 2054-2539 bp Feature: domain Description: Glu-decarb-GAD Location: 2123-2504 bp Feature: domain Description: Glu-decarb-GAD Location: 21 23-2504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Glu-decarb-GAD (TIGR01788)

Seq: JHRE01000005.1 Escherichia coli strain 302014 302014_5, whole genome shotgun sequence (39911 bp)
Overview 1 RT 1: 11952-16330 bp Neighborhood of RT #1 [11952, 16330] TraD PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 11952-12263 bp Feature: domain Description: TraD Location: 12066-12240 bp Feature: domain Description: TraD Location: 12 066-12 2 40 bp Feature: gene Location: 13071-14573 bp Feature: domain Description: PRK13889 Location: 13074-13653 bp Feature: domain Description: PRK13889 Location: 13074-13653 bp Feature: gene Location: 14650-15750 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14791-15343 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14791-15343 bp Feature: gene Location: 15743-16024 bp Feature: domain Description: HTH_XRE Location: 15758-15923 bp Feature: domain Description: HTH_XRE Location: 15758-1592 3 bp Feature: gene Location: 16115-16330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)

Seq: JHRE01000527.1 Escherichia coli strain 302014 302014_527, whole genome shotgun sequence (1574 bp)
Overview 1 RT 1: 191-1328 bp Neighborhood of RT #1 [191, 1573] RVT-GII GIIM Feature: gene Location: 191-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-1055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 23 -1055 bp Feature: domain Description: GIIM Note: maturase Location: 1130-1328 bp Feature: domain Description: GIIM Note: maturase Location: 113 0-13 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)