myRT

myRT report for GCA_001265415.1_401031

Download annotations/find similar RTs

Seq: JHRL01000001.1 Escherichia coli strain 401031 401031_1, whole genome shotgun sequence (259297 bp)
Overview 1 RT 1: 234022-238273 bp Neighborhood of RT #1 [234022, 238273] HipA_Ec_like HipA_Ec_like RVT-Retrons AAA_23 SMC_prok_A Feature: gene Location: 234022-234525 bp Feature: domain Description: HipA_Ec_like Location: 234085-234322 bp Feature: domain Description: HipA_Ec_like Location: 234085-234322 bp Feature: domain Description: HipA_Ec_like Location: 234325-234502 bp Feature: domain Description: HipA_Ec_like Location: 234325-234502 bp Feature: gene Location: 234615-235022 bp Feature: gene Location: 235146-235547 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 235248-235491 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 235248-235491 bp Feature: gene Location: 235992-237785 bp Feature: domain Description: AAA_23 Location: 236046-236781 bp Feature: domain Description: AAA_23 Location: 236046-236781 bp Feature: domain Description: SMC_prok_A Location: 237024-237342 bp Feature: domain Description: SMC_prok_A Location: 237024-237342 bp Feature: gene Location: 237788-238273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipA_Ec_like (cd17808), RVT-Retrons, AAA_23 (pfam13476), SMC_prok_A (TIGR02169)

Seq: JHRL01000023.1 Escherichia coli strain 401031 401031_23, whole genome shotgun sequence (59011 bp)
Overview 1 RT 1: 46118-49997 bp Neighborhood of RT #1 [46118, 50002] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 46118-46834 bp Feature: domain Description: rph Location: 46121-46829 bp Feature: domain Description: rph Location: 4612 1-4682 9 bp Feature: gene Location: 46885-47541 bp Feature: domain Description: pyrE Location: 46903-47536 bp Feature: domain Description: pyrE Location: 46903-47536 bp Feature: gene Location: 47838-48797 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47973-48522 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47973-4852 2 bp Feature: gene Location: 48841-49437 bp Feature: domain Description: slmA Location: 48847-49423 bp Feature: domain Description: slmA Location: 48847-4942 3 bp Feature: gene Location: 49544-50002 bp Feature: domain Description: dut Location: 49550-49997 bp Feature: domain Description: dut Location: 49550-49997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)