myRT

myRT report for GCA_001265935.1_401817

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Seq: JHSL01000002.1 Escherichia coli strain 401817 401817_2, whole genome shotgun sequence (379810 bp)
Overview 1 RT 1: 363756-367860 bp Neighborhood of RT #1 [363756, 367860] PRK13889 RVT-UG16 Feature: gene Location: 363756-363887 bp Feature: gene Location: 363920-365416 bp Feature: domain Description: PRK13889 Location: 363923-364526 bp Feature: domain Description: PRK1 3889 Location: 363923-364526 bp Feature: gene Location: 365549-367033 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 365912-366320 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 36591 2-366320 bp Feature: gene Location: 367133-367696 bp Feature: gene Location: 367705-367860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16

Seq: JHSL01000044.1 Escherichia coli strain 401817 401817_44, whole genome shotgun sequence (33270 bp)
Overview 1 RT 1: 24907-27821 bp Neighborhood of RT #1 [24907, 27886] RVT-GII GIIM PHA02517 Feature: gene Location: 24907-25050 bp Feature: gene Location: 25075-25278 bp Feature: gene Location: 25346-26869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25619-26351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5619-2 6351 bp Feature: domain Description: GIIM Note: maturase Location: 26426-26624 bp Feature: domain Description: GIIM Note: maturase Location: 2 642 6-2 662 4 bp Feature: gene Location: 26823-27248 bp Feature: gene Location: 27461-27886 bp Feature: domain Description: PHA02517 Location: 27485-27821 bp Feature: domain Description: PHA02 517 Location: 2 7485-2 782 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)