myRT

myRT report for GCA_001265975.1_402310

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Seq: JHSM01000001.1 Escherichia coli strain 402310 402310_1, whole genome shotgun sequence (379810 bp)
Overview 1 RT 1: 363757-367861 bp Neighborhood of RT #1 [363757, 367861] PRK13889 RVT-UG16 Feature: gene Location: 363757-363888 bp Feature: gene Location: 363921-365417 bp Feature: domain Description: PRK13889 Location: 363924-364527 bp Feature: domain Description: PRK1 3889 Location: 363924-364527 bp Feature: gene Location: 365550-367034 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 365913-366321 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 36591 3-366321 bp Feature: gene Location: 367134-367697 bp Feature: gene Location: 367706-367861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16

Seq: JHSM01000043.1 Escherichia coli strain 402310 402310_43, whole genome shotgun sequence (35121 bp)
Overview 1 RT 1: 26759-29673 bp Neighborhood of RT #1 [26759, 29738] RVT-GII GIIM PHA02517 Feature: gene Location: 26759-26902 bp Feature: gene Location: 26927-27130 bp Feature: gene Location: 27198-28721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27471-28203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7471-2 82 03 bp Feature: domain Description: GIIM Note: maturase Location: 28278-28476 bp Feature: domain Description: GIIM Note: maturase Location: 2 82 78-2 8476 bp Feature: gene Location: 28675-29100 bp Feature: gene Location: 29313-29738 bp Feature: domain Description: PHA02517 Location: 29337-29673 bp Feature: domain Description: PHA02 517 Location: 2 9337-2 9673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)