myRT

myRT report for GCA_001266115.1_102535

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Seq: JHST01000060.1 Escherichia coli strain 102535 102535_60, whole genome shotgun sequence (20114 bp)
Overview 1 RT 1: 15866-18916 bp Neighborhood of RT #1 [15866, 19806] RVT-UG16 PRK13889 Feature: gene Location: 15866-16021 bp Feature: gene Location: 16030-16593 bp Feature: gene Location: 16693-18177 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 17056-17464 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 1 7056-1 7464 bp Feature: gene Location: 18310-19806 bp Feature: domain Description: PRK13889 Location: 18313-18916 bp Feature: domain Description: PRK1 3889 Location: 1 831 3-1 891 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: JHST01000063.1 Escherichia coli strain 102535 102535_63, whole genome shotgun sequence (8830 bp)
Overview 1 RT 1: 430-3595 bp Neighborhood of RT #1 [430, 3600] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 430-639 bp Feature: gene Location: 774-2675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041-1872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1041-1872 bp Feature: domain Description: Intron_maturas2 Location: 1986-2244 bp Feature: domain Description: Intron_maturas2 Location: 1986-2 2 44 bp Feature: domain Description: HNHc Note: nucleases Location: 2418-2580 bp Feature: domain Description: HNHc Note: nucleases Location: 2 418-2 580 bp Feature: gene Location: 2870-3310 bp Feature: domain Description: PRK13732 Location: 2876-3308 bp Feature: domain Description: PRK13732 Location: 2 876-3308 bp Feature: gene Location: 3367-3600 bp Feature: domain Description: DUF905 Location: 3397-3595 bp Feature: domain Description: DUF905 Location: 3397-3595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)