myRT

myRT report for GCA_001266255.1_302312

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Seq: JHTA01000050.1 Escherichia coli strain 302312 302312_50, whole genome shotgun sequence (26888 bp)
Overview 1 RT 1: 668-4354 bp Neighborhood of RT #1 [668, 4404] RVT_N RVT-GII GIIM HNHc PRK13756 MFS_TetA Feature: gene Location: 668-2335 bp Feature: domain Description: RVT_N Location: 716-953 bp Feature: domain Description: RVT_N Location: 71 6-953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-1646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 004-1 646 bp Feature: domain Description: GIIM Note: maturase Location: 1697-1931 bp Feature: domain Description: GIIM Note: maturase Location: 1 697-1 931 bp Feature: domain Description: HNHc Note: nucleases Location: 2141-2300 bp Feature: domain Description: HNHc Note: nucleases Location: 21 41 -2300 bp Feature: gene Location: 2494-3120 bp Feature: domain Description: PRK13756 Location: 2500-3112 bp Feature: domain Description: PRK1 3756 Location: 2500-31 1 2 bp Feature: gene Location: 3199-4404 bp Feature: domain Description: MFS_TetA Location: 3217-4354 bp Feature: domain Description: MFS_TetA Location: 321 7-4354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK13756 (TetR family transcriptional regulator), MFS_TetA (cd17388)

Seq: JHTA01000006.1 Escherichia coli strain 302312 302312_6, whole genome shotgun sequence (243026 bp)
Overview 1 RT 1: 122839-128267 bp Neighborhood of RT #1 [122839, 128267] RVT-UG5 nitrilase PRK09692 Feature: gene Location: 122839-122982 bp Feature: gene Location: 122988-123677 bp Feature: gene Location: 123674-126550 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 124148-124676 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12 4148-12 4676 bp Feature: domain Description: nitrilase Location: 125888-126470 bp Feature: domain Description: nitrilase Location: 12 5888-12 6470 bp Feature: gene Location: 126642-127898 bp Feature: domain Description: PRK09692 Location: 126651-127854 bp Feature: domain Description: PRK09692 Location: 12 6651-12 7854 bp Feature: gene Location: 128043-128267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), PRK09692 (Integrase; provisional)