myRT

myRT report for GCA_001266355.1_401195

Download annotations/find similar RTs

Seq: JHTF01000029.1 Escherichia coli strain 401195 401195_29, whole genome shotgun sequence (50767 bp)
Overview 1 RT 1: 37875-41754 bp Neighborhood of RT #1 [37875, 41759] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 37875-38591 bp Feature: domain Description: rph Location: 37878-38586 bp Feature: domain Description: rph Location: 37878-38586 bp Feature: gene Location: 38642-39298 bp Feature: domain Description: pyrE Location: 38660-39293 bp Feature: domain Description: pyrE Location: 38660-39293 bp Feature: gene Location: 39595-40554 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39730-40279 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39730-40279 bp Feature: gene Location: 40598-41194 bp Feature: domain Description: slmA Location: 40604-41180 bp Feature: domain Description: slmA Location: 40604-41 1 80 bp Feature: gene Location: 41301-41759 bp Feature: domain Description: dut Location: 41307-41754 bp Feature: domain Description: dut Location: 41 307-41 754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: JHTF01000060.1 Escherichia coli strain 401195 401195_60, whole genome shotgun sequence (27781 bp)
Overview 1 RT 1: 23931-27686 bp Neighborhood of RT #1 [23931, 27686] AAA_23 SMC_prok_A RVT-Retrons Feature: gene Location: 23931-25757 bp Feature: domain Description: AAA_23 Location: 23985-24720 bp Feature: domain Description: AAA_2 3 Location: 2 3985-2 472 0 bp Feature: domain Description: SMC_prok_A Location: 24963-25281 bp Feature: domain Description: SMC_prok_A Location: 2 4963-2 52 81 bp Feature: gene Location: 25925-26386 bp Feature: gene Location: 26754-27155 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26856-27099 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 6856-2 7099 bp Feature: gene Location: 27279-27686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), SMC_prok_A (TIGR02169), RVT-Retrons