myRT

myRT report for GCA_001266905.1_ASM126690v1

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Seq: LHYY01000021.1 Clostridium botulinum strain 51714-DC plasmid p1BKT015925 contig_21, whole genome shotgun sequence (170794 bp)
Overview 1 RT 1: 55283-59764 bp Neighborhood of RT #1 [55283, 59764] RVT-GII HNHc Feature: gene Location: 55283-55627 bp Feature: gene Location: 55633-55866 bp Feature: gene Location: 55950-57845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56250-56985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56250-56985 bp Feature: domain Description: HNHc Note: nucleases Location: 57579-57708 bp Feature: domain Description: HNHc Note: nucleases Location: 57579-57708 bp Feature: gene Location: 58593-59159 bp Feature: gene Location: 59414-59764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LHYY01000027.1 Clostridium botulinum strain 51714-DC contig_27, whole genome shotgun sequence (21304 bp)
Overview 1 RT 1: 12131-17807 bp Neighborhood of RT #1 [12131, 17941] XRE RVT-GII HNHc DUF3887 YhfC Feature: gene Location: 12131-12343 bp Feature: domain Description: XRE Location: 12152-12338 bp Feature: domain Description: XRE Location: 12 152 -12 338 bp Feature: gene Location: 12340-12657 bp Feature: gene Location: 13071-14906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13389-14109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13389-14109 bp Feature: domain Description: HNHc Note: nucleases Location: 14691-14784 bp Feature: domain Description: HNHc Note: nucleases Location: 14691-14784 bp Feature: gene Location: 16777-17172 bp Feature: domain Description: DUF3887 Location: 16897-17161 bp Feature: domain Description: DUF3887 Location: 16897-17161 bp Feature: gene Location: 17150-17941 bp Feature: domain Description: YhfC Location: 17240-17807 bp Feature: domain Description: YhfC Location: 172 40-17807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XRE (COG1476), RVT-GII, HNHc (smart00507), DUF3887 (pfam13026), YhfC (COG4377)