myRT

myRT report for GCA_001266955.1_ASM126695v1

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Seq: LHYX01000006.1 Clostridium botulinum strain 47295-DC plasmid p1BKT015925 contig_6, whole genome shotgun sequence (170794 bp)
Overview 1 RT 1: 55283-59764 bp Neighborhood of RT #1 [55283, 59764] RVT-GII HNHc Feature: gene Location: 55283-55627 bp Feature: gene Location: 55633-55866 bp Feature: gene Location: 55950-57845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56250-56985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56250-56985 bp Feature: domain Description: HNHc Note: nucleases Location: 57579-57708 bp Feature: domain Description: HNHc Note: nucleases Location: 57579-57708 bp Feature: gene Location: 58593-59159 bp Feature: gene Location: 59414-59764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LHYX01000056.1 Clostridium botulinum strain 47295-DC contig_56, whole genome shotgun sequence (21305 bp)
Overview 1 RT 1: 3365-9170 bp Neighborhood of RT #1 [3365, 9175] YhfC DUF3887 RVT-GII HNHc XRE Feature: gene Location: 3365-4156 bp Feature: domain Description: YhfC Location: 3455-4022 bp Feature: domain Description: YhfC Location: 3455-402 2 bp Feature: gene Location: 4134-4529 bp Feature: domain Description: DUF3887 Location: 4254-4518 bp Feature: domain Description: DUF3887 Location: 42 54-4518 bp Feature: gene Location: 6400-8235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6718-7438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6718-7438 bp Feature: domain Description: HNHc Note: nucleases Location: 8020-8113 bp Feature: domain Description: HNHc Note: nucleases Location: 802 0-8113 bp Feature: gene Location: 8649-8966 bp Feature: gene Location: 8963-9175 bp Feature: domain Description: XRE Location: 8984-9170 bp Feature: domain Description: XRE Location: 8984-9170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhfC (COG4377), DUF3887 (pfam13026), RVT-GII, HNHc (smart00507), XRE (COG1476)