myRT

myRT report for GCA_001267345.1_303289

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Seq: JHRJ01000038.1 Escherichia coli strain 303289 303289_38, whole genome shotgun sequence (35787 bp)
Overview 1 RT 1: 24747-30677 bp Neighborhood of RT #1 [24747, 30862] AAA_23 Smc RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 24747-26573 bp Feature: domain Description: AAA_23 Location: 24801-25536 bp Feature: domain Description: AAA_23 Location: 24801 -25536 bp Feature: domain Description: Smc Location: 25782-26073 bp Feature: domain Description: Smc Location: 25782-26073 bp Feature: gene Location: 26741-27202 bp Feature: gene Location: 27625-28560 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27727-28327 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27727-28327 bp Feature: gene Location: 28557-30209 bp Feature: domain Description: COG3950 Location: 28755-30171 bp Feature: domain Description: COG3950 Location: 28755-301 71 bp Feature: gene Location: 30212-30862 bp Feature: domain Description: TIGR02646 Location: 30278-30677 bp Feature: domain Description: TIGR02646 Location: 30278-30677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), Smc (COG1196), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: JHRJ01000068.1 Escherichia coli strain 303289 303289_68, whole genome shotgun sequence (27623 bp)
Overview 1 RT 1: 8933-12812 bp Neighborhood of RT #1 [8933, 12817] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 8933-9391 bp Feature: domain Description: dut Location: 8939-9386 bp Feature: domain Description: dut Location: 8939-9386 bp Feature: gene Location: 9498-10094 bp Feature: domain Description: slmA Location: 9504-10080 bp Feature: domain Description: slmA Location: 9504-10080 bp Feature: gene Location: 10138-11097 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10273-10822 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102 73-1082 2 bp Feature: gene Location: 11394-12050 bp Feature: domain Description: pyrE Location: 11412-12045 bp Feature: domain Description: pyrE Location: 11412 -12 045 bp Feature: gene Location: 12101-12817 bp Feature: domain Description: rph Location: 12104-12812 bp Feature: domain Description: rph Location: 12 104-12 812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), dut (TIGR00576), slmA (PRK09480)