myRT

myRT report for GCA_001267945.1_ASM126794v1

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Seq: LFWL01000062.1 Vibrio alginolyticus strain RM-24-2 contig62, whole genome shotgun sequence (408727 bp)
Overview 1 RT 1: 318685-322747 bp Neighborhood of RT #1 [318685, 323685] TIGR02646 COG3950 RVT-Retrons CsgD SEC-C Feature: gene Location: 318685-319458 bp Ori: KOE84921.1 Feature: domain Description: TIGR02646 Location: 318757-319288 bp Feature: domain Description: TIGR02646 Location: 31 8757-31 9288 bp Feature: gene Location: 319445-321073 bp Ori: KOE84922.1 Feature: domain Description: COG3950 Location: 319631-320954 bp Feature: domain Description: COG3950 Location: 31 9631 -320954 bp Feature: gene Location: 321063-322007 bp Ori: KOE84923.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 321162-321759 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 321 1 62-321 759 bp Feature: gene Location: 322296-322580 bp Ori: KOE84924.1 Feature: domain Description: CsgD Location: 322428-322554 bp Feature: domain Description: CsgD Location: 322428-322554 bp Feature: gene Location: 322681-323685 bp Ori: KOE85000.1 Feature: domain Description: SEC-C Location: 322696-322747 bp Feature: domain Description: SEC-C Location: 322696-322747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, CsgD (COG2771), SEC-C (pfam02810)