myRT

myRT report for GCA_001268925.1_1.EC2732.1

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Seq: CXXY01000054.1 Escheichia coli genome assembly 1.EC2732.1, contig O76_54, whole genome shotgun sequence (2269 bp)
Overview 1 RT 1: 2-1933 bp Neighborhood of RT #1 [2, 2178] RVT-GII GIIM Feature: gene Location: 2-361 bp Feature: gene Location: 655-2178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928-1660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928-1 660 bp Feature: domain Description: GIIM Note: maturase Location: 1735-1933 bp Feature: domain Description: GIIM Note: maturase Location: 1 735-1 933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CXXY01000055.1 Escheichia coli genome assembly 1.EC2732.1, contig O76_55, whole genome shotgun sequence (4735 bp)
Overview 1 RT 1: 1198-4610 bp Neighborhood of RT #1 [1198, 4618] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 1198-1497 bp Feature: domain Description: InsE Location: 1228-1492 bp Feature: domain Description: InsE Location: 12 2 8-1492 bp Feature: gene Location: 1494-1961 bp Feature: domain Description: PHA02517 Location: 1560-1899 bp Feature: domain Description: PHA02 517 Location: 1560-1899 bp Feature: gene Location: 2553-3794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2826-3558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 6-3558 bp Feature: domain Description: GIIM Note: maturase Location: 3633-3789 bp Feature: domain Description: GIIM Note: maturase Location: 3633-3789 bp Feature: gene Location: 3846-4076 bp Feature: gene Location: 4187-4618 bp Feature: domain Description: Tra5 Location: 4193-4610 bp Feature: domain Description: Tra5 Location: 4193-4610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: CXXY01000080.1 Escheichia coli genome assembly 1.EC2732.1, contig O76_80, whole genome shotgun sequence (23118 bp)
Overview 1 RT 1: 3377-7377 bp Neighborhood of RT #1 [3377, 7385] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 3377-4738 bp Feature: domain Description: DcuC Location: 3380-4712 bp Feature: domain Description: DcuC Location: 3 3 80-4712 bp Feature: gene Location: 4791-5162 bp Feature: gene Location: 5384-5830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5690-5792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5690-5792 bp Feature: gene Location: 5878-6027 bp Feature: gene Location: 6354-7385 bp Feature: domain Description: Asparaginase_2 Location: 6444-7377 bp Feature: domain Description: Asparaginase_2 Location: 6444-73 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)