myRT

myRT report for GCA_001269985.1_ASM126998v1

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Seq: BBZB01000001.1 Pseudoalteromonas sp. '520P1 No. 423' DNA, contig: contig_1, whole genome shotgun sequence (4070934 bp)
Overview 1 RT 1: 1839455-1844212 bp 2 RT 2: 3733289-3739333 bp Neighborhood of RT #1 [1839455, 1844364] PDDEXK_5 RVT-Retrons HNH_2 Neighborhood of RT #2 [3733289, 3739908] PRK09692 INT_P4_C RVT-GII GIIM Rhs_assc_core Feature: gene Location: 1839455-1839853 bp Feature: domain Description: PDDEXK_5 Location: 1839527-1839680 bp Feature: domain Description: PDDEXK_5 Location: 1 839527-1 839680 bp Feature: gene Location: 1839931-1840308 bp Feature: gene Location: 1840520-1841665 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1840745-1841393 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 840745-1 841 393 bp Feature: gene Location: 1841863-1843026 bp Feature: gene Location: 1843084-1844364 bp Feature: domain Description: HNH_2 Location: 1844056-1844212 bp Feature: domain Description: HNH_2 Location: 1 844056-1 84421 2 bp Feature: gene Location: 3733289-3734509 bp Feature: domain Description: PRK09692 Location: 3733355-3733733 bp Feature: domain Description: PRK09692 Location: 3733355-3733733 bp Feature: domain Description: INT_P4_C Location: 3733919-3734450 bp Feature: domain Description: INT_P4_C Location: 373391 9-3734450 bp Feature: gene Location: 3734962-3735297 bp Feature: gene Location: 3735942-3737297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3736236-3736860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3736236-3736860 bp Feature: domain Description: GIIM Note: maturase Location: 3736902-3737106 bp Feature: domain Description: GIIM Note: maturase Location: 3736902-37371 06 bp Feature: gene Location: 3737377-3737778 bp Feature: gene Location: 3737953-3739908 bp Feature: domain Description: Rhs_assc_core Location: 3739051-3739333 bp Feature: domain Description: Rhs_assc_core Location: 3739051 -3739333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_5 (pfam11645), RVT-Retrons, HNH_2 (pfam13391), PRK09692 (Integrase; provisional), INT_P4_C (cd00801), RVT-GII, GIIM (pfam08388), Rhs_assc_core (TIGR03696)

Seq: BBZB01000002.1 Pseudoalteromonas sp. '520P1 No. 423' DNA, contig: contig_2, whole genome shotgun sequence (1316679 bp)
Overview 1 RT 1: 1083492-1087090 bp 2 RT 2: 1196819-1202215 bp Neighborhood of RT #1 [1083492, 1087110] RVT-GII GIIM PRK15442 Neighborhood of RT #2 [1196819, 1202215] GIIM RVT-GII RVT-GII GIIM RVT-GII Feature: gene Location: 1083492-1083665 bp Feature: gene Location: 1083847-1084062 bp Feature: gene Location: 1084278-1085546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1084572-1085196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1084572 -1085196 bp Feature: domain Description: GIIM Note: maturase Location: 1085238-1085442 bp Feature: domain Description: GIIM Note: maturase Location: 10852 38-1085442 bp Feature: gene Location: 1086004-1086156 bp Feature: gene Location: 1086208-1087110 bp Feature: domain Description: PRK15442 Location: 1086274-1087090 bp Feature: domain Description: PRK15442 Location: 10862 74-1087090 bp Feature: gene Location: 1196819-1197217 bp Feature: gene Location: 1197286-1197630 bp Feature: domain Description: GIIM Note: maturase Location: 1197301-1197439 bp Feature: domain Description: GIIM Note: maturase Location: 1197301-1197439 bp Feature: gene Location: 1197670-1198530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1197853-1198477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1197853-1198477 bp Feature: gene Location: 1199090-1199467 bp Feature: gene Location: 1199663-1200391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1199669-1200041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1199669-12 00041 bp Feature: domain Description: GIIM Note: maturase Location: 1200083-1200287 bp Feature: domain Description: GIIM Note: maturase Location: 12 00083-12 002 87 bp Feature: gene Location: 1200467-1200820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1200650-1200812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 00650-12 00812 bp Feature: gene Location: 1201395-1201646 bp Feature: gene Location: 1202012-1202215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK15442 (beta-lactamase TEM; Provisional)