myRT

myRT report for GCA_001270025.1_Sazu_1.0

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Seq: DF968294.1 Streptomyces azureus DNA, scaffold: SAZU111, strain: ATCC14921, whole genome shotgun sequence (15771 bp)
Overview 1 RT 1: 677-6526 bp Neighborhood of RT #1 [677, 6526] PIN_MT3492-like RVT-UG23 Sa_NUDIX Feature: gene Location: 677-1504 bp Feature: gene Location: 1563-1982 bp Ori: GAP49223.1 Feature: domain Description: PIN_MT3492-like Location: 1662-1866 bp Feature: domain Description: PIN_MT3492-like Location: 1 662-1 866 bp Feature: gene Location: 3659-4999 bp Ori: GAP49224.1 Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 3719-4313 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 371 9-431 3 bp Feature: gene Location: 5009-5800 bp Ori: GAP49225.1 Feature: domain Description: Sa_NUDIX Location: 5204-5798 bp Feature: domain Description: Sa_NUDIX Location: 5204-5798 bp Feature: gene Location: 6146-6526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_MT3492-like (cd09874), RVT-UG23, Sa_NUDIX (pfam18167)

Seq: DF968300.1 Streptomyces azureus DNA, scaffold: SAZU117, strain: ATCC14921, whole genome shotgun sequence (50771 bp)
Overview 1 RT 1: 31732-37633 bp Neighborhood of RT #1 [31732, 37638] PRK05578 deoA RVT_N RVT-GII GIIM HNH DUF820 YfdV Feature: gene Location: 31732-32136 bp Ori: GAP49400.1 Feature: domain Description: PRK05578 Location: 31759-32128 bp Feature: domain Description: PRK05578 Location: 31759-32 12 8 bp Feature: gene Location: 32222-33505 bp Ori: GAP49401.1 Feature: domain Description: deoA Location: 32231-33500 bp Feature: domain Description: deoA Location: 32 2 31-33500 bp Feature: gene Location: 34293-36038 bp Ori: GAP49402.1 Feature: domain Description: RVT_N Location: 34341-34584 bp Feature: domain Description: RVT_N Location: 34341-34584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34638-35286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34638-352 86 bp Feature: domain Description: GIIM Note: maturase Location: 35337-35565 bp Feature: domain Description: GIIM Note: maturase Location: 35337-35565 bp Feature: domain Description: HNH Note: nucleases Location: 35898-35997 bp Feature: domain Description: HNH Note: nucleases Location: 35898-35997 bp Feature: gene Location: 36022-36714 bp Ori: GAP49403.1 Feature: domain Description: DUF820 Location: 36223-36664 bp Feature: domain Description: DUF82 0 Location: 362 2 3-36664 bp Feature: gene Location: 36718-37638 bp Ori: GAP49404.1 Feature: domain Description: YfdV Location: 36742-37633 bp Feature: domain Description: YfdV Location: 36742 -37633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05578 (cytidine deaminase; Validated), deoA (PRK05820), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF820, YfdV (COG0679)