myRT

myRT report for GCA_001270725.1_ASM127072v1

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Seq: LHQO01000194.1 Burkholderia pseudomallei strain ST1381 contig_194, whole genome shotgun sequence (18720 bp)
Overview 1 RT 1: 997-6748 bp Neighborhood of RT #1 [997, 6759] PinE AAA_21 AAA_21 RVT-Retrons AlpA Feature: gene Location: 997-1572 bp Feature: domain Description: PinE Location: 1006-1555 bp Feature: domain Description: PinE Location: 1 006-1 555 bp Feature: gene Location: 1967-3310 bp Feature: domain Description: AAA_21 Location: 2048-2198 bp Feature: domain Description: AAA_21 Location: 2048-21 98 bp Feature: domain Description: AAA_21 Location: 2540-2711 bp Feature: domain Description: AAA_21 Location: 2540-271 1 bp Feature: gene Location: 3307-4380 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3541-4099 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3541 -4099 bp Feature: gene Location: 5124-5900 bp Feature: gene Location: 6448-6759 bp Feature: domain Description: AlpA Location: 6562-6748 bp Feature: domain Description: AlpA Location: 6562-6748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), AAA_21 (pfam13304), RVT-Retrons, AlpA (COG3311)

Seq: LHQO01000059.1 Burkholderia pseudomallei strain ST1381 contig_59, whole genome shotgun sequence (35587 bp)
Overview 1 RT 1: 4520-8013 bp Neighborhood of RT #1 [4520, 8021] RVT-UG7 PinE Feature: gene Location: 4520-4837 bp Feature: gene Location: 4850-5389 bp Feature: gene Location: 5461-7065 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5878-6298 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5878-62 98 bp Feature: gene Location: 7218-7361 bp Feature: gene Location: 7419-8021 bp Feature: domain Description: PinE Location: 7422-8013 bp Feature: domain Description: PinE Location: 742 2 -8013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PinE (COG1961)