myRT

myRT report for GCA_001273755.1_ASM127375v1

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Seq: LGYA01000001.1 Bacillus butanolivorans strain DSM 18926 super1, whole genome shotgun sequence (4601026 bp)
Overview 1 RT 1: 436750-442282 bp 2 RT 2: 515063-521772 bp 3 RT 3: 2528255-2532886 bp 4 RT 4: 4114751-4123019 bp Neighborhood of RT #1 [436750, 442299] GntR RVT-GII GIIM CwlJ Neighborhood of RT #2 [515063, 521786] M20_Acy1_YhaA-like DUF3953 RVT-GII GIIM DedA Acetyltransf_1 Neighborhood of RT #3 [2528255, 2532891] RVT-GII GIIM purU Neighborhood of RT #4 [4114751, 4123030] CE4_BH1302_like RVT-GII GIIM bacter_Pnkp bacter_Hen1 Feature: gene Location: 436750-437418 bp Feature: domain Description: GntR Location: 436759-437404 bp Feature: domain Description: GntR Location: 436759-437404 bp Feature: gene Location: 437601-437915 bp Feature: gene Location: 438521-439795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438722-439337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 438722-439337 bp Feature: domain Description: GIIM Note: maturase Location: 439397-439607 bp Feature: domain Description: GIIM Note: maturase Location: 439397-439607 bp Feature: gene Location: 441329-441691 bp Feature: gene Location: 441859-442299 bp Feature: domain Description: CwlJ Location: 441865-442282 bp Feature: domain Description: CwlJ Location: 441 865-442282 bp Feature: gene Location: 515063-516250 bp Feature: domain Description: M20_Acy1_YhaA-like Location: 515084-516218 bp Feature: domain Description: M20_Acy1 _YhaA-like Location: 51 5084-51 621 8 bp Feature: gene Location: 516589-516816 bp Feature: domain Description: DUF3953 Location: 516679-516799 bp Feature: domain Description: DUF3953 Location: 51 6679-51 6799 bp Feature: gene Location: 517745-519007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517943-518561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 7943-51 8561 bp Feature: domain Description: GIIM Note: maturase Location: 518612-518825 bp Feature: domain Description: GIIM Note: maturase Location: 51 861 2-51 8825 bp Feature: gene Location: 519270-519878 bp Feature: domain Description: DedA Location: 519297-519861 bp Feature: domain Description: DedA Location: 51 9297-51 9861 bp Feature: gene Location: 521370-521786 bp Feature: domain Description: Acetyltransf_1 Location: 521484-521772 bp Feature: domain Description: Acetyltransf_1 Location: 521 484-521 772 bp Feature: gene Location: 2528255-2529517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2528453-2529071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2528453-2529071 bp Feature: domain Description: GIIM Note: maturase Location: 2529122-2529335 bp Feature: domain Description: GIIM Note: maturase Location: 25291 22-2529335 bp Feature: gene Location: 2530307-2530492 bp Feature: gene Location: 2532022-2532891 bp Feature: domain Description: purU Location: 2532046-2532886 bp Feature: domain Description: purU Location: 2532046-2532886 bp Feature: gene Location: 4114751-4115197 bp Feature: gene Location: 4116339-4117037 bp Feature: domain Description: CE4_BH1302_like Location: 4116465-4117029 bp Feature: domain Description: CE4_BH1 302_like Location: 41 1 6465-41 1 7029 bp Feature: gene Location: 4117226-4118500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4117427-4118042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 7427-41 1 8042 bp Feature: domain Description: GIIM Note: maturase Location: 4118102-4118312 bp Feature: domain Description: GIIM Note: maturase Location: 41 1 81 02-41 1 831 2 bp Feature: gene Location: 4119090-4121681 bp Feature: domain Description: bacter_Pnkp Location: 4119093-4121679 bp Feature: domain Description: bacter_Pnkp Location: 41 1 9093-41 21 679 bp Feature: gene Location: 4121684-4123030 bp Feature: domain Description: bacter_Hen1 Location: 4121693-4123019 bp Feature: domain Description: bacter_Hen1 Location: 41 21 693-41 2301 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GntR (pfam00392), RVT-GII, GIIM (pfam08388), CwlJ (COG3773), M20_Acy1_YhaA-like (cd08021), DUF3953 (pfam13129), DedA (COG0586), Acetyltransf_1 (pfam00583), purU (PRK13010), CE4_BH1302_like (cd10956)
bacter_Pnkp (TIGR04075), bacter_Hen1 (TIGR04074)