myRT

myRT report for GCA_001275675.1_ASM127567v1

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Seq: LITM01000009.1 Lysinibacillus sp. FJAT-14745 scaffold9606345, whole genome shotgun sequence (606345 bp)
Overview 1 RT 1: 255161-261305 bp Neighborhood of RT #1 [255161, 261305] PRK13927 PRK00024 RVT-GII Intron_maturas2 HNHc Maf Feature: gene Location: 255161-256180 bp Feature: domain Description: PRK13927 Location: 255170-256169 bp Feature: domain Description: PRK1 3927 Location: 2551 70-2561 69 bp Feature: gene Location: 256781-257047 bp Feature: domain Description: PRK00024 Location: 256850-257042 bp Feature: domain Description: PRK00024 Location: 256850-257042 bp Feature: gene Location: 257090-258901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257354-258185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257354-2581 85 bp Feature: domain Description: Intron_maturas2 Location: 258263-258590 bp Feature: domain Description: Intron_maturas2 Location: 258263-258590 bp Feature: domain Description: HNHc Note: nucleases Location: 258698-258872 bp Feature: domain Description: HNHc Note: nucleases Location: 258698-258872 bp Feature: gene Location: 259966-260559 bp Feature: domain Description: Maf Location: 259981-260539 bp Feature: domain Description: Maf Location: 259981 -260539 bp Feature: gene Location: 260658-261305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13927 (rod shape-determining protein MreB; Provisional), PRK00024 (DNA repair protein RadC), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Maf (pfam02545)

Seq: LITM01000006.1 Lysinibacillus sp. FJAT-14745 scaffold6595309, whole genome shotgun sequence (595309 bp)
Overview 1 RT 1: 551922-558935 bp Neighborhood of RT #1 [551922, 559378] DltE RVT-GII GIIM RutF Beta-lactamase Feature: gene Location: 551922-553010 bp Feature: gene Location: 554118-554819 bp Feature: domain Description: DltE Location: 554124-554802 bp Feature: domain Description: DltE Location: 55412 4-554802 bp Feature: gene Location: 555581-556843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555779-556397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555779-556397 bp Feature: domain Description: GIIM Note: maturase Location: 556448-556658 bp Feature: domain Description: GIIM Note: maturase Location: 556448-556658 bp Feature: gene Location: 557033-557659 bp Feature: domain Description: RutF Location: 557078-557624 bp Feature: domain Description: RutF Location: 557078-55762 4 bp Feature: gene Location: 557915-559378 bp Feature: domain Description: Beta-lactamase Location: 557987-558935 bp Feature: domain Description: Beta-lactamase Location: 557987-558935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DltE (COG3967), RVT-GII, GIIM (pfam08388), RutF (TIGR03615), Beta-lactamase (pfam00144)

Seq: LITM01000005.1 Lysinibacillus sp. FJAT-14745 scaffold5608734, whole genome shotgun sequence (608734 bp)
Overview 1 RT 1: 182175-183873 bp 2 RT 2: 475848-480525 bp Neighborhood of RT #1 [182175, 184001] RVT-GII HNHc Neighborhood of RT #2 [475848, 480525] YxiJ RVT-GII HNHc APH Feature: gene Location: 182175-184001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182481-183177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182481-183 177 bp Feature: domain Description: HNHc Note: nucleases Location: 183723-183873 bp Feature: domain Description: HNHc Note: nucleases Location: 183 723 -183 873 bp Feature: gene Location: 475848-476246 bp Feature: domain Description: YxiJ Location: 475866-476199 bp Feature: domain Description: YxiJ Location: 475866-476199 bp Feature: gene Location: 476500-478272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476758-477454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476758-477454 bp Feature: domain Description: HNHc Note: nucleases Location: 478009-478150 bp Feature: domain Description: HNHc Note: nucleases Location: 478009-478150 bp Feature: gene Location: 478981-479835 bp Feature: domain Description: APH Location: 479044-479620 bp Feature: domain Description: APH Location: 479044-479620 bp Feature: gene Location: 480223-480525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), YxiJ (pfam14176), APH (pfam01636)